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Polymorphism of microsatellite loci in silver (Hypophthalmichthys molitrix Val.) and bighead (Hypophthalmichthys nobilis Rich.) carps grown in aquaculture in the Republic of Belarus

https://doi.org/10.29235/1561-8323-2019-63-1-79-86

Abstract

In this study, we evaluated the genetic diversity of silver (Hypophthalmichthys molitrix Val.) and bighead (Hypophthalmichthys nobilis Rich.) carps grown in aquaculture in the territory of the Republic of Belarus. Genotyping was obtained for 11 STR-loci - Hmo11, Hmo13, Hmo15, Hmo25, Hmo26, Hmo31, Hmo33, Hmo 34, Hmo36, Hmo37, and Hmo40. The following parameters were calculated: the average number of alleles per locus, the effective number of alleles, the levels of expected and observed heterozygosity, the value of the Shannon information index and the fixation indexes FIS and FST. The obtained results indicate a moderate (for silver carp) and sufficiently high (for bighead carp) genetic diversity of the studied samples of carps up to the possibility to allocate several groups for subsequent work on obtaining linear material and further reproduction, including commercial fish. However, to achieve these goals, it is necessary to pay special attention to the selection of pairs of producers taking into account the results of molecular genetic analysis. The scheme for the differentiation of hybrid individuals between silver and bighead carps and the use of molecular genetic analysis of STR-loci would be proposed. This approach can be used as a minimally invasive rapid test in breeding and reproductive programs for the studied fish species.

Communicated by Academician A. V. Kilchevsky

About the Authors

A. Yu. Nosova
Institute of Genetics and Cytology, National Academy of Sciences of Belarus
Belarus

Nosova Aliaksandra Yurevna - Researcher.

27, Akademicheskaya Str., 220072, Minsk



V. N. Kipen
Institute of Genetics and Cytology, National Academy of Sciences of Belarus
Belarus

Kipen Viachaslau Nikolaevich - Ph. D. (Biology), Researcher.

27, Akademicheskaya Str., 220072, Minsk



N. I. Tsar
Institute of Genetics and Cytology, National Academy of Sciences of Belarus
Belarus

Tsar Nastassia Ivanovna - Junior researcher.

27, Akademicheskaya Str., 220072, Minsk



S. N. Pantelej
Fish Industry Institute
Belarus

Pantelej Sergej Nikolaevich - Ph. D. (Agrarian), Head of the Laboratory.

22, Stebenev Str., 220024, Minsk



I. A. Savchenko
Fish Industry Institute
Belarus

Savchenko Irina Andreevna - Junior researcher.

22, Stebenev Str., 220024, Minsk



V. D. Sennikova
Fish Industry Institute
Belarus

Sennikova Violetta Dmitrievna - Senior researcher.

22, Stebenev Str., 220024, Minsk



V. Yu. Ageyets
Fish Industry Institute
Belarus

Ageyets Vladimir Yulyanovich - D. Sc. (Agrarian), Professor, Director. Fish Industry Institute

22, Stebenev Str., 220024, Minsk



V. A. Lemesh
Institute of Genetics and Cytology, National Academy of Sciences of Belarus
Belarus

Lemesh Valentina Alexandrovna - Ph. D. (Biology), Assistant professor, Head of the Laboratory.

27, Akademicheskaya Str., 220072, Minsk



References

1. Contributing to food security and nutrition for all: The state of world fisheries and aquaculture. Rome, 2016. 190 p.

2. Vlasov V A., Maslova N. I., Pavlov A. D. Both preservation and genepool recovery in fish of russian aquaculture. Iz-vestiya Timiryazevskoi sel’skokhozyaistvennoi akademii = Proceedings of the Timiryazev Agricultural Academy, 2012. no. 5, pp. 83-92 (in Russian).

3. Zhu C., Tong J., Yu X., Guo W., Wang X., Liu H., Feng X., Sun Y, Liu L., Fu B. A second-generation genetic linkage map for bighead carp (Aristichthys nobilis) based on microsatellite markers. Animal Genetics, 2014, vol. 45, no. 5, pp. 699-708. https://doi.org/10.1111/age.12194

4. Chen Q., Wang C., Lu G., Zhao J., Chapman D. C., Zsigmond J., Li S. Microsatellite genetic diversity and differentiation of native and introduced grass carp populations in three continents. Genetica, 2012, vol. 140, no. 4-6, pp. 115-123. https://doi.org/10.1007/s10709-012-9663-8

5. Zalepuhin V V Optimization of estimating the quality of producers of carp in aquaculture. Astrahan, 2009. 48 p. (in Russian).

6. Fedorova N. N., Zalepukhin V V. Some diagnostic aspects of endogenous heterogeneity conception. Vestnik of Astrakhan State Technical University = Vestnik Astrakhanskogo gosudarstvennogo tekhnicheskogo universiteta, 2007, no. 3, pp. 51-55 (in Russian).

7. Mia M. Y, Taggart J. B., Gilmour A. E., Gheyas A. A., Das T. K., Kohinoor A. H. M., Rahman M. A., Sattar M. A., Hussain M. G., Mazid M. A., Penman D. J., McAndrew B. J. Detection of hybridization between Chinese carp species (Hypophthalmichthys molitrix and Aristichthys nobilis) in hatchery broodstock in Bangladesh, using DNA microsatellite loci. Aquaculture, 2005, vol. 247, no. 1-4, pp. 267-273. https://doi.org/10.1016/j.aquaculture.2005.02.018

8. Cheyas A. A., Cairney M., Gilmour A. E., Sattar M. A., Das T. K., McAndrew B. J., Penman D. J., Taggart J. B. Characterization of microsatellite loci in silver carp (Hypophthalmichthys molitrix), and cross-amplification in other cyprinid species. Molecular Ecology Resources, 2006. vol. 6, no. 3, pp. 656-659. https://doi.org/10.1111/j.1471-8286.2006.01288.

9. Peakall R., Smouse P. E. GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research-an update. Bioinformatics, 2012, vol. 28. no. 19, pp. 2537-2539. https://doi.org/10.1093/bioinformatics/bts460

10. Pritchard J. K., Stephens M., Donnelly P. Inference of Population Structure Using Multilocus Genotype Data. Genetics, 2000, vol. 155, no. 2, pp. 945-959.

11. Hammer 0., Harper A. T., Ryan P. D. Past: Paleontological Statistics Software Package for Education and Data Analysis. Palaeontologia Electronica, 2001, vol. 4, no. 1, pp. 1-9.

12. Francis R. M. Pophelper: an R package and web app to analyse and visualize population structure. Molecular Ecology Resources, 2017, vol. 17, no. 1, pp. 27-32. https://doi.org/10.1111/1755-0998.12509


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ISSN 1561-8323 (Print)
ISSN 2524-2431 (Online)